Eca_sc000076.1_g1340.1
Sequence
Init: Term:
reverse complement
BLAST
nr KYP44533.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 794 1 768 0.0 169.01 54.78 70.90
Subject 1342 1 756
Annot Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]
araport AT1G48720.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 794 2 95 5e-27 12.21 6.42 8.81
Subject 97 3 94
Annot | Copia-like polyprotein/retrotransposon | Chr1:18018148-18018441 FORWARD LENGTH=97 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
superfamily SSF53098 Ribonuclease H-like 529 707 5.6e-48 IPR012337
Gene3D G3DSA:4.10.60.10 no description 285 307 0.00058 IPR001878
Gene3D G3DSA:3.30.420.10 no description 530 690 9.8e-37 NULL
ProfileScan PS50158 ZF_CCHC 292 305 9.422 IPR001878
ProfileScan PS50994 INTEGRASE 532 698 24.327 IPR001584
Coil coil coiled-coil 773 794 NA NULL
HMMPanther PTHR11439:SF127 PREDICTED PROTEIN (FRAGMENT) 10 793 8.2e-236 NULL
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 10 793 8.2e-236 NULL
HMMPfam PF14223 UBN2 90 205 9.2e-36 NULL
HMMPfam PF00665 rve 534 651 2.6e-33 IPR001584
HMMPfam PF13976 gag_pre-integrs 463 520 2.3e-15 IPR025724
HMMPfam PF13961 DUF4219 12 37 7e-10 IPR025314
HMMPfam PF00098 zf-CCHC 291 306 0.0002 IPR001878

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