Eca_sc000081.1_g1500.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_015868924.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1162 15 1161 0.0 149.22 59.46 76.41
Subject 1734 588 1732
Annot PREDICTED: uncharacterized protein LOC107406328 [Ziziphus jujuba]
araport ATMG00860.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1162 410 537 3e-24 13.59 4.38 6.45
Subject 158 3 131
Annot | DNA/RNA polymerases superfamily protein | ChrM:235916-236392 FORWARD LENGTH=158 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMSmart SM00298 Chromatin organization modifier domain 1098 1157 1.3e-06 IPR000953
ProfileScan PS50013 CHROMO_2 1099 1162 12.956 IPR000953
ProfileScan PS50878 RT_POL 263 444 11.745 IPR000477
ProfileScan PS50994 INTEGRASE 792 951 21.166 IPR001584
PatternScan PS00141 ASP_PROTEASE 54 65 NA IPR001969
superfamily SSF56672 DNA/RNA polymerases 206 638 3.2e-174 NULL
superfamily SSF53098 Ribonuclease H-like 789 957 3.2e-41 IPR012337
superfamily SSF50630 Acid proteases 33 140 4e-13 IPR021109
superfamily SSF54160 Chromo domain-like 1059 1160 2.9e-12 IPR016197
HMMPanther PTHR10178:SF14 RETROVIRUS POLYPROTEIN 3 1150 0 NULL
HMMPanther PTHR10178 GAG/POL/ENV POLYPROTEIN 3 1150 0 NULL
Coil coil coiled-coil 973 1001 NA NULL
HMMPfam PF00078 RVT_1 285 444 1.3e-19 IPR000477
HMMPfam PF00665 rve 794 908 6.5e-19 IPR001584
HMMPfam PF13975 gag-asp_proteas 38 99 6.3e-14 NULL
HMMPfam PF00385 Chromo 1100 1152 2.4e-10 IPR023780
Gene3D G3DSA:3.10.10.10 no description 233 365 3.8e-30 NULL
Gene3D G3DSA:3.30.70.270 no description 366 444 2.3e-07 NULL
Gene3D G3DSA:3.30.420.10 no description 795 955 5.9e-27 NULL
Gene3D G3DSA:2.40.50.40 no description 1096 1159 6.8e-10 NULL

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