Eca_sc000081.1_g2930.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_010260794.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 446 36 446 0.0 97.98 58.07 77.13
Subject 437 23 434
Annot PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nelumbo nucifera]
araport AT1G33350.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 446 34 441 3e-96 120.62 36.09 56.72
Subject 538 95 498
Annot | Pentatricopeptide repeat (PPR) superfamily protein | Chr1:12090071-12091687 REVERSE LENGTH=538 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
superfamily SSF48452 TPR-like 129 207 0.0038 NULL
superfamily SSF48452 TPR-like 343 436 0.0053 NULL
HMMPfam PF01535 PPR 136 164 5.4e-06 IPR002885
HMMPfam PF01535 PPR 167 192 5.8e-07 IPR002885
HMMPfam PF01535 PPR 342 367 0.0006 IPR002885
HMMPfam PF01535 PPR 416 437 0.16 IPR002885
HMMPfam PF13041 PPR_2 268 314 9.1e-14 IPR002885
Gene3D G3DSA:1.25.40.10 no description 234 431 9.4e-08 IPR011990
HMMPanther PTHR24015:SF136 SUBFAMILY NOT NAMED 40 444 1.2e-149 NULL
HMMPanther PTHR24015 FAMILY NOT NAMED 40 444 1.2e-149 NULL
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 136 164 3.2e-05 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 167 200 3.2e-07 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 270 304 1.9e-09 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 305 338 2.7e-05 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 343 367 0.00049 IPR002885
ProfileScan PS51375 PPR 164 199 10.402 IPR002885
ProfileScan PS51375 PPR 133 163 9.043 IPR002885
ProfileScan PS51375 PPR 103 132 5.119 IPR002885
ProfileScan PS51375 PPR 268 302 12.715 IPR002885
ProfileScan PS51375 PPR 237 267 7.805 IPR002885
ProfileScan PS51375 PPR 303 333 8.046 IPR002885
ProfileScan PS51375 PPR 339 369 7.848 IPR002885
ProfileScan PS51375 PPR 371 401 6.807 IPR002885
ProfileScan PS51375 PPR 407 437 7.454 IPR002885

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