Eca_sc000093.1_g0610.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_010265146.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 768 4 634 0.0 82.68 52.73 63.41
Subject 635 2 635
Annot PREDICTED: KH domain-containing protein At4g18375-like isoform X3 [Nelumbo nucifera]
araport AT5G15270.3 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 768 12 493 e-106 69.40 26.30 37.63
Subject 533 18 462
Annot | RNA-binding KH domain-containing protein | Chr5:4958738-4960737 FORWARD LENGTH=533 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
ProfileScan PS50084 KH_TYPE_1 47 118 13.963 IPR004088
ProfileScan PS50084 KH_TYPE_1 168 237 14.969 IPR004088
ProfileScan PS50084 KH_TYPE_1 318 388 14.005 IPR004088
ProfileScan PS50084 KH_TYPE_1 400 469 14.320 IPR004088
ProfileScan PS50084 KH_TYPE_1 550 613 13.167 IPR004088
Gene3D G3DSA:3.30.1370.10 no description 46 101 1.2e-13 NULL
Gene3D G3DSA:3.30.1370.10 no description 164 243 4.3e-15 NULL
Gene3D G3DSA:3.30.1370.10 no description 317 389 4e-13 NULL
Gene3D G3DSA:3.30.1370.10 no description 393 474 2.2e-15 NULL
Gene3D G3DSA:3.30.1370.10 no description 553 618 1e-10 NULL
HMMPanther PTHR10288:SF53 KH DOMAIN-CONTAINING PROTEIN 12 671 6.5e-124 NULL
HMMPanther PTHR10288 KH DOMAIN CONTAINING RNA BINDING PROTEIN 12 671 6.5e-124 NULL
HMMPfam PF00013 KH_1 50 100 2.4e-12 IPR004088
HMMPfam PF00013 KH_1 170 229 1.7e-12 IPR004088
HMMPfam PF00013 KH_1 321 369 4.8e-12 IPR004088
HMMPfam PF00013 KH_1 403 469 3.1e-11 IPR004088
HMMPfam PF00013 KH_1 554 612 2.4e-08 IPR004088
superfamily SSF54791 Eukaryotic type KH-domain (KH-domain type I) 155 243 1.3e-15 NULL
superfamily SSF54791 Eukaryotic type KH-domain (KH-domain type I) 34 103 1e-14 NULL
superfamily SSF54791 Eukaryotic type KH-domain (KH-domain type I) 387 475 2e-14 NULL
superfamily SSF54791 Eukaryotic type KH-domain (KH-domain type I) 306 400 2.2e-14 NULL
superfamily SSF54791 Eukaryotic type KH-domain (KH-domain type I) 549 631 2.6e-11 NULL
HMMSmart SM00322 K homology RNA-binding domain 46 148 1.9e-08 IPR004087
HMMSmart SM00322 K homology RNA-binding domain 167 242 4.3e-09 IPR004087
HMMSmart SM00322 K homology RNA-binding domain 317 393 8.7e-09 IPR004087
HMMSmart SM00322 K homology RNA-binding domain 399 474 2.8e-08 IPR004087
HMMSmart SM00322 K homology RNA-binding domain 549 618 4.2e-08 IPR004087

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