Eca_sc000093.1_g1140.1
Sequence
Init: Term:
reverse complement
BLAST
nr CAN81579.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1095 1 1054 0.0 112.51 40 55.89
Subject 1232 1 1054
Annot hypothetical protein VITISV_023185 [Vitis vinifera]
araport AT3G24255.5 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1095 561 1052 4e-43 48.58 11.87 19.72
Subject 532 8 490
Annot | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | Chr3:8789309-8790907 FORWARD LENGTH=532 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMPfam PF00078 RVT_1 381 638 3.2e-41 IPR000477
HMMPfam PF13966 zf-RVT 908 993 1.3e-23 IPR026960
HMMPanther PTHR19446:SF34 NON-LTR RETROELEMENT REVERSE TRANSCRIPTASE RELATED 1 1047 1.9e-193 NULL
HMMPanther PTHR19446 REVERSE TRANSCRIPTASES 1 1047 1.9e-193 NULL
ProfileScan PS50878 RT_POL 361 641 20.171 IPR000477
Gene3D G3DSA:3.60.10.10 no description 5 111 3.6e-09 IPR005135
superfamily SSF56672 DNA/RNA polymerases 323 614 6.9e-19 NULL
superfamily SSF56219 DNase I-like 13 114 1e-15 IPR005135

Top