Eca_sc000108.1_g0340.1
Sequence
Init: Term:
reverse complement
BLAST
nr AAD21687.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 597 12 597 e-142 237.01 40.36 58.96
Subject 1415 416 982
Annot Strong similarity to gi|3600044 T12H20.12 protease homolog from Arabidopsis thaliana BAC gb|AF080119 and is a member of the reverse transcriptase family PF|00078 [Arabidopsis thaliana]
araport AT4G23160.3 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 597 467 597 1e-33 174.70 10.72 15.07
Subject 1043 78 208
Annot | cysteine-rich RECEPTOR-like kinase | Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMPfam PF07727 RVT_2 501 597 2.3e-40 IPR013103
HMMPfam PF00665 rve 110 226 2.3e-22 IPR001584
HMMPfam PF13976 gag_pre-integrs 49 98 1.6e-07 IPR025724
ProfileScan PS50994 INTEGRASE 109 275 18.550 IPR001584
superfamily SSF53098 Ribonuclease H-like 106 281 9.7e-39 IPR012337
superfamily SSF56672 DNA/RNA polymerases 500 596 8.5e-06 NULL
Gene3D G3DSA:3.30.420.10 no description 108 268 1.1e-24 NULL
HMMPanther PTHR11439:SF127 PREDICTED PROTEIN (FRAGMENT) 59 597 1e-180 NULL
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 59 597 1e-180 NULL

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