Eca_sc000108.1_g2030.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_010250943.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 516 9 515 0.0 98.64 75.58 87.98
Subject 509 2 508
Annot PREDICTED: protein tipD-like [Nelumbo nucifera]
araport AT5G50230.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 516 11 516 0.0 98.64 67.44 83.52
Subject 509 4 509
Annot | Transducin/WD40 repeat-like superfamily protein | Chr5:20448632-20450855 REVERSE LENGTH=509 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
superfamily SSF50978 WD40 repeat-like 220 516 4.1e-71 IPR017986
HMMSmart SM00320 WD40 repeats 221 260 7.2e-06 IPR001680
HMMSmart SM00320 WD40 repeats 263 302 8.7e-05 IPR001680
HMMSmart SM00320 WD40 repeats 305 345 1.1e-08 IPR001680
HMMSmart SM00320 WD40 repeats 348 386 8e-06 IPR001680
HMMSmart SM00320 WD40 repeats 389 428 0.0023 IPR001680
HMMSmart SM00320 WD40 repeats 431 474 0.15 IPR001680
HMMSmart SM00320 WD40 repeats 477 516 0.0051 IPR001680
PatternScan PS00678 WD_REPEATS_1 247 261 NA IPR019775
PatternScan PS00678 WD_REPEATS_1 332 346 NA IPR019775
PatternScan PS00678 WD_REPEATS_1 373 387 NA IPR019775
FPrintScan PR00320 GPROTEINBRPT 247 261 8.6e-08 IPR020472
FPrintScan PR00320 GPROTEINBRPT 332 346 8.6e-08 IPR020472
FPrintScan PR00320 GPROTEINBRPT 373 387 8.6e-08 IPR020472
Gene3D G3DSA:2.130.10.10 no description 196 516 4.7e-73 IPR015943
Coil coil coiled-coil 86 128 NA NULL
Coil coil coiled-coil 135 163 NA NULL
Coil coil coiled-coil 171 192 NA NULL
HMMPanther PTHR19878 AUTOPHAGY PROTEIN 16-LIKE 17 516 2.6e-128 NULL
ProfileScan PS50082 WD_REPEATS_2 228 269 12.580 IPR001680
ProfileScan PS50082 WD_REPEATS_2 270 311 10.508 IPR001680
ProfileScan PS50082 WD_REPEATS_2 312 354 13.516 IPR001680
ProfileScan PS50082 WD_REPEATS_2 363 395 10.742 IPR001680
ProfileScan PS50082 WD_REPEATS_2 396 431 8.971 IPR001680
ProfileScan PS50082 WD_REPEATS_2 484 516 9.606 IPR001680
ProfileScan PS50294 WD_REPEATS_REGION 228 516 48.986 IPR017986
HMMPfam PF00400 WD40 223 260 3.2e-07 IPR001680
HMMPfam PF00400 WD40 267 302 0.0079 IPR001680
HMMPfam PF00400 WD40 309 345 1.2e-07 IPR001680
HMMPfam PF00400 WD40 350 386 1.1e-05 IPR001680
HMMPfam PF00400 WD40 394 428 0.00056 IPR001680
HMMPfam PF00400 WD40 453 474 0.0035 IPR001680
HMMPfam PF00400 WD40 480 515 0.0019 IPR001680
HMMPfam PF08614 ATG16 49 176 2.3e-10 IPR013923

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