Eca_sc000108.1_g2610.1
Sequence
Init: Term:
reverse complement
BLAST
nr BAA11674.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1323 1 1316 0.0 101.13 58.88 74.07
Subject 1338 1 1326
Annot unnamed protein product [Nicotiana tabacum]
araport AT4G23160.3 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1323 794 1267 3e-88 78.83 13.07 20.55
Subject 1043 78 544
Annot | cysteine-rich RECEPTOR-like kinase | Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
superfamily SSF53098 Ribonuclease H-like 469 647 9e-44 IPR012337
superfamily SSF56672 DNA/RNA polymerases 830 1274 2e-24 NULL
superfamily SSF57756 Retrovirus zinc finger-like domains 221 249 4.5e-06 IPR001878
HMMSmart SM00343 zinc finger 228 244 0.0022 IPR001878
Gene3D G3DSA:4.10.60.10 no description 219 248 2e-06 IPR001878
Gene3D G3DSA:3.30.420.10 no description 473 623 2.3e-31 NULL
HMMPanther PTHR11439:SF127 PREDICTED PROTEIN (FRAGMENT) 14 1322 0 NULL
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 14 1322 0 NULL
ProfileScan PS50158 ZF_CCHC 228 244 10.131 IPR001878
ProfileScan PS50994 INTEGRASE 470 638 23.476 IPR001584
HMMPfam PF07727 RVT_2 831 1078 3.8e-102 IPR013103
HMMPfam PF14227 UBN2_2 76 193 6.7e-32 NULL
HMMPfam PF00665 rve 477 591 1e-30 IPR001584
HMMPfam PF13976 gag_pre-integrs 398 461 1.7e-13 IPR025724
HMMPfam PF00098 zf-CCHC 228 244 0.00016 IPR001878

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