Eca_sc000108.1_g2870.1
Sequence
Init: Term:
reverse complement
BLAST
nr KYP69041.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1354 1 1349 0.0 99.11 59.15 75.40
Subject 1342 1 1340
Annot Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]
araport AT4G23160.3 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1354 823 1307 e-110 77.03 14.40 21.34
Subject 1043 66 553
Annot | cysteine-rich RECEPTOR-like kinase | Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
ProfileScan PS50158 ZF_CCHC 292 305 9.422 IPR001878
ProfileScan PS50994 INTEGRASE 532 698 22.947 IPR001584
HMMPanther PTHR11439:SF127 PREDICTED PROTEIN (FRAGMENT) 7 1349 0 NULL
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 7 1349 0 NULL
Gene3D G3DSA:3.30.420.10 no description 530 690 1.1e-35 NULL
HMMPfam PF07727 RVT_2 869 1114 3.9e-102 IPR013103
HMMPfam PF14223 UBN2 90 204 1.1e-35 NULL
HMMPfam PF00665 rve 535 651 2.8e-31 IPR001584
HMMPfam PF13976 gag_pre-integrs 454 520 7.3e-16 IPR025724
HMMPfam PF13961 DUF4219 12 37 4.5e-10 IPR025314
HMMPfam PF00098 zf-CCHC 291 306 0.00035 IPR001878
superfamily SSF53098 Ribonuclease H-like 529 704 8.7e-48 IPR012337
superfamily SSF56672 DNA/RNA polymerases 868 1305 6e-31 NULL

Top