Eca_sc000108.1_g3080.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_010276285.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 746 15 738 0.0 97.45 56.30 74.53
Subject 727 1 727
Annot PREDICTED: pentatricopeptide repeat-containing protein At3g49740 [Nelumbo nucifera] XP_010276286.1 PREDICTED: pentatricopeptide repeat-containing protein At3g49740 [Nelumbo nucifera]
araport AT3G49740.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 746 19 737 0.0 98.79 47.05 65.41
Subject 737 16 735
Annot | Tetratricopeptide repeat (TPR)-like superfamily protein | Chr3:18447788-18450001 FORWARD LENGTH=737 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
ProfileScan PS51375 PPR 157 191 9.273 IPR002885
ProfileScan PS51375 PPR 126 156 8.046 IPR002885
ProfileScan PS51375 PPR 260 294 8.988 IPR002885
ProfileScan PS51375 PPR 227 257 7.859 IPR002885
ProfileScan PS51375 PPR 192 226 5.601 IPR002885
ProfileScan PS51375 PPR 295 329 6.884 IPR002885
ProfileScan PS51375 PPR 361 395 12.737 IPR002885
ProfileScan PS51375 PPR 427 461 9.701 IPR002885
ProfileScan PS51375 PPR 558 592 10.337 IPR002885
ProfileScan PS51375 PPR 527 557 6.380 IPR002885
ProfileScan PS51375 PPR 594 629 9.657 IPR002885
ProfileScan PS51375 PPR 630 660 7.881 IPR002885
ProfileScan PS51375 PPR 696 730 8.243 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 262 296 0.00036 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 363 396 2.2e-09 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 430 454 7.3e-05 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 560 594 1.5e-05 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 597 629 0.00015 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 634 657 0.00053 IPR002885
HMMPanther PTHR24015:SF169 PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN 111 738 2.1e-215 NULL
HMMPanther PTHR24015 FAMILY NOT NAMED 111 738 2.1e-215 NULL
Gene3D G3DSA:1.25.40.10 no description 693 718 1.2e-11 IPR011990
HMMPfam PF13041 PPR_2 360 404 6.3e-09 IPR002885
HMMPfam PF13041 PPR_2 557 606 1.7e-10 IPR002885
HMMPfam PF01535 PPR 128 153 0.012 IPR002885
HMMPfam PF01535 PPR 160 189 0.0026 IPR002885
HMMPfam PF01535 PPR 231 257 0.0098 IPR002885
HMMPfam PF01535 PPR 262 290 0.055 IPR002885
HMMPfam PF01535 PPR 431 457 9.8e-05 IPR002885
HMMPfam PF01535 PPR 460 487 0.14 IPR002885
HMMPfam PF01535 PPR 633 657 0.00058 IPR002885
HMMPfam PF01535 PPR 700 727 0.53 IPR002885
superfamily SSF48452 TPR-like 122 425 0.00021 NULL
superfamily SSF48452 TPR-like 554 716 0.00067 NULL

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