Eca_sc000108.1_g3150.1
Sequence
Init: Term:
reverse complement
BLAST
nr AAT85031.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1427 28 1427 0.0 100.70 39.10 55.85
Subject 1437 14 1437
Annot putative polyprotein [Oryza sativa Japonica Group] ABF96679.1 retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa Japonica Group]
araport AT4G23160.3 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1427 949 1404 e-101 73.09 13.03 18.99
Subject 1043 84 579
Annot | cysteine-rich RECEPTOR-like kinase | Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
ProfileScan PS50158 ZF_CCHC 292 305 8.944 IPR001878
ProfileScan PS50994 INTEGRASE 522 688 24.150 IPR001584
HMMPanther PTHR11439:SF127 PREDICTED PROTEIN (FRAGMENT) 84 1419 0 NULL
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 84 1419 0 NULL
Gene3D G3DSA:3.30.420.10 no description 523 681 5.8e-29 NULL
HMMPfam PF07727 RVT_2 977 1019 1.3e-10 IPR013103
HMMPfam PF07727 RVT_2 1020 1183 4.4e-59 IPR013103
HMMPfam PF00665 rve 526 640 5e-29 IPR001584
HMMPfam PF14223 UBN2 118 225 5.5e-22 NULL
HMMPfam PF13976 gag_pre-integrs 438 511 2.9e-11 IPR025724
superfamily SSF53098 Ribonuclease H-like 518 694 1.7e-48 IPR012337
superfamily SSF56672 DNA/RNA polymerases 976 1375 6.7e-33 NULL

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