Eca_sc000108.1_g3490.1
Sequence
Init: Term:
reverse complement
BLAST
nr CAN63950.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1289 1 1285 0.0 119.86 66.33 79.59
Subject 1545 197 1477
Annot hypothetical protein VITISV_032357 [Vitis vinifera]
araport ATMG00860.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1289 602 731 2e-29 12.25 4.65 6.28
Subject 158 1 131
Annot | DNA/RNA polymerases superfamily protein | ChrM:235916-236392 FORWARD LENGTH=158 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
ProfileScan PS50878 RT_POL 459 638 12.422 IPR000477
ProfileScan PS50994 INTEGRASE 984 1143 22.080 IPR001584
HMMPanther PTHR10178:SF14 RETROVIRUS POLYPROTEIN 197 1270 0 NULL
HMMPanther PTHR10178 GAG/POL/ENV POLYPROTEIN 197 1270 0 NULL
Gene3D G3DSA:3.10.10.10 no description 427 572 7e-33 NULL
Gene3D G3DSA:3.30.420.10 no description 983 1136 1.4e-23 NULL
HMMPfam PF00078 RVT_1 479 638 3.6e-24 IPR000477
HMMPfam PF03732 Retrotrans_gag 2 92 5.2e-18 IPR005162
HMMPfam PF00665 rve 986 1097 6.4e-15 IPR001584
HMMPfam PF13975 gag-asp_proteas 233 295 1.9e-08 NULL
superfamily SSF56672 DNA/RNA polymerases 400 832 8.4e-184 NULL
superfamily SSF53098 Ribonuclease H-like 981 1149 1.9e-40 IPR012337
superfamily SSF50630 Acid proteases 228 335 2.4e-11 IPR021109

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