Eca_sc000117.1_g0830.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_010261583.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 554 6 552 0.0 106.31 79.42 89.89
Subject 589 5 583
Annot PREDICTED: ruBisCO large subunit-binding protein subunit beta, chloroplastic [Nelumbo nucifera]
araport AT1G26230.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 554 3 546 0.0 110.28 72.56 85.37
Subject 611 6 581
Annot | TCP-1/cpn60 chaperonin family protein | Chr1:9072388-9075272 REVERSE LENGTH=611 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMPanther PTHR11353:SF8 RUBISCO SUBUNIT BINDING-PROTEIN BETA SUBUNIT, RUBB 23 549 4.3e-303 NULL
HMMPanther PTHR11353 CHAPERONIN 23 549 4.3e-303 IPR002423
superfamily SSF52029 GroEL apical domain-like 226 409 1.7e-67 IPR027409
superfamily SSF48592 GroEL equatorial domain-like 37 265 2.2e-54 IPR002423
superfamily SSF48592 GroEL equatorial domain-like 406 532 2.1e-16 IPR002423
HMMPfam PF00118 Cpn60_TCP1 58 473 1.6e-91 IPR002423
HMMPfam PF00118 Cpn60_TCP1 474 530 4.6e-09 IPR002423
FPrintScan PR00298 CHAPERONIN60 62 88 2.5e-57 IPR001844
FPrintScan PR00298 CHAPERONIN60 118 145 2.5e-57 IPR001844
FPrintScan PR00298 CHAPERONIN60 302 325 2.5e-57 IPR001844
FPrintScan PR00298 CHAPERONIN60 384 409 2.5e-57 IPR001844
FPrintScan PR00298 CHAPERONIN60 432 453 2.5e-57 IPR001844
Coil coil coiled-coil 453 474 NA NULL
Gene3D G3DSA:1.10.560.10 no description 44 240 6.3e-35 IPR027413
Gene3D G3DSA:3.50.7.10 no description 241 369 4.2e-51 IPR027409
Gene3D G3DSA:1.10.560.10 no description 477 532 1.7e-09 IPR027413
PatternScan PS00296 CHAPERONINS_CPN60 439 450 NA IPR018370

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