Eca_sc000118.1_g0250.1
Sequence
Init: Term:
reverse complement
BLAST
nr EEE50824.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1118 50 1098 0.0 142.57 31.75 49.82
Subject 1594 399 1510
Annot hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
araport AT4G29090.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 1118 649 1110 2e-35 51.43 11.71 20.93
Subject 575 2 511
Annot | Ribonuclease H-like superfamily protein | Chr4:14333528-14335255 FORWARD LENGTH=575 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
superfamily SSF56219 DNase I-like 2 177 4.6e-19 IPR005135
superfamily SSF56672 DNA/RNA polymerases 288 572 9.8e-17 NULL
superfamily SSF53098 Ribonuclease H-like 1026 1107 1.8e-07 IPR012337
HMMPfam PF00078 RVT_1 343 603 2.8e-47 IPR000477
HMMPfam PF13966 zf-RVT 852 937 2e-11 IPR026960
HMMPfam PF03372 Exo_endo_phos 9 169 3.3e-10 IPR005135
Gene3D G3DSA:3.30.420.10 no description 1028 1107 0.00034 NULL
HMMPanther PTHR19446:SF34 NON-LTR RETROELEMENT REVERSE TRANSCRIPTASE RELATED 1 992 2.2e-157 NULL
HMMPanther PTHR19446 REVERSE TRANSCRIPTASES 1 992 2.2e-157 NULL
ProfileScan PS50878 RT_POL 324 605 16.214 IPR000477

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