| nr | AFP55574.1 | Length | Start | End | E-value | Length(%) | Iden(%) | Posi(%) | |
|---|---|---|---|---|---|---|---|---|---|
| Query | 762 | 3 | 762 | e-159 | 217.32 | 37.27 | 56.29 | ||
| Subject | 1656 | 627 | 1398 | ||||||
| Annot | non-ltr retroelement reverse transcriptase [Rosa rugosa] | ||||||||
| araport | AT1G43760.1 | Length | Start | End | E-value | Length(%) | Iden(%) | Posi(%) | |
| Query | 762 | 110 | 492 | 2e-34 | 82.15 | 14.17 | 24.93 | ||
| Subject | 626 | 218 | 621 | ||||||
| Annot | | DNAse I-like superfamily protein | Chr1:16528880-16531065 REVERSE LENGTH=626 | 201606 | ||||||||
| Analysis | Signature | Location | E-value | InterPro | ||
|---|---|---|---|---|---|---|
| Accession | Description | Start | Stop | |||
| ProfileScan | PS50878 | RT_POL | 447 | 728 | 16.932 | IPR000477 |
| superfamily | SSF56219 | DNase I-like | 1 | 213 | 1.4e-24 | IPR005135 |
| superfamily | SSF56672 | DNA/RNA polymerases | 409 | 707 | 3.6e-17 | NULL |
| HMMPfam | PF00078 | RVT_1 | 468 | 727 | 6e-47 | IPR000477 |
| HMMPfam | PF03372 | Exo_endo_phos | 1 | 205 | 1e-11 | IPR005135 |
| HMMPanther | PTHR19446:SF34 | NON-LTR RETROELEMENT REVERSE TRANSCRIPTASE RELATED | 6 | 762 | 1.9e-189 | NULL |
| HMMPanther | PTHR19446 | REVERSE TRANSCRIPTASES | 6 | 762 | 1.9e-189 | NULL |
| Coil | coil | coiled-coil | 269 | 290 | NA | NULL |
| Gene3D | G3DSA:3.60.10.10 | no description | 2 | 210 | 2.4e-15 | IPR005135 |