| nr | AAP94600.1 | Length | Start | End | E-value | Length(%) | Iden(%) | Posi(%) | |
|---|---|---|---|---|---|---|---|---|---|
| Query | 731 | 1 | 537 | 8e-89 | 132.55 | 25.17 | 36.66 | ||
| Subject | 969 | 97 | 591 | ||||||
| Annot | putative copia-like retrotransposon Hopscotch polyprotein, partial [Zea mays] | ||||||||
| araport | AT1G34070.1 | Length | Start | End | E-value | Length(%) | Iden(%) | Posi(%) | |
| Query | 731 | 6 | 156 | 4e-12 | 42.13 | 6.70 | 10.12 | ||
| Subject | 308 | 120 | 263 | ||||||
| Annot | | Copia-like polyprotein/retrotransposon | Chr1:12402283-12403209 FORWARD LENGTH=308 | 201606 | ||||||||
| Analysis | Signature | Location | E-value | InterPro | ||
|---|---|---|---|---|---|---|
| Accession | Description | Start | Stop | |||
| HMMPanther | PTHR11439:SF127 | PREDICTED PROTEIN (FRAGMENT) | 1 | 713 | 4.8e-123 | NULL |
| HMMPanther | PTHR11439 | GAG-POL-RELATED RETROTRANSPOSON | 1 | 713 | 4.8e-123 | NULL |
| superfamily | SSF53098 | Ribonuclease H-like | 334 | 472 | 2.8e-31 | IPR012337 |
| ProfileScan | PS50158 | ZF_CCHC | 164 | 177 | 9.043 | IPR001878 |
| ProfileScan | PS50994 | INTEGRASE | 369 | 466 | 15.308 | IPR001584 |
| HMMPfam | PF00665 | rve | 350 | 418 | 1.3e-15 | IPR001584 |
| HMMPfam | PF14223 | UBN2 | 2 | 86 | 6.4e-13 | NULL |
| Gene3D | G3DSA:3.30.420.10 | no description | 357 | 468 | 1.8e-18 | NULL |