Eca_sc000058.1_g0610.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_010252902.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 325 52 320 e-105 102.46 48.30 63.07
Subject 333 45 309
Annot PREDICTED: high mobility group B protein 10 [Nelumbo nucifera]
araport AT1G04880.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 325 43 320 1e-73 137.84 43.38 56.30
Subject 448 9 311
Annot | HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain-containing protein | Chr1:1376106-1378264 REVERSE LENGTH=448 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMPanther PTHR22970 FAMILY NOT NAMED 41 154 6.7e-19 NULL
superfamily SSF46774 ARID-like 45 165 1.8e-27 IPR001606
superfamily SSF47095 HMG-box 251 320 6e-11 IPR009071
ProfileScan PS51011 ARID 63 154 24.960 IPR001606
HMMPfam PF01388 ARID 62 150 1.9e-18 IPR001606
HMMPfam PF00505 HMG_box 273 321 1.7e-07 IPR009071
Gene3D G3DSA:1.10.150.60 no description 60 161 2.4e-25 IPR001606
Gene3D G3DSA:1.10.30.10 no description 271 320 3.6e-09 IPR009071
HMMSmart SM01014 ARID/BRIGHT DNA binding domain 60 150 1.1e-26 NULL
HMMSmart SM00501 BRIGHT, ARID (A/T-rich interaction domain) d 64 155 4.5e-25 IPR001606

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