Eca_sc000058.1_g3310.1
Sequence
Init: Term:
reverse complement
BLAST
nr AAG50698.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 197 1 192 2e-78 670.05 63.45 75.63
Subject 1320 400 591
Annot copia-type polyprotein, putative [Arabidopsis thaliana] AAG50765.1 copia-type polyprotein, putative [Arabidopsis thaliana]
araport # Length Start End E-value Length(%) Iden(%) Posi(%)
Query # # # # # # #
Subject # # #
Annot
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMPfam PF13976 gag_pre-integrs 56 111 2.9e-16 IPR025724
HMMPfam PF00665 rve 126 188 3.7e-12 IPR001584
HMMPanther PTHR11439:SF127 PREDICTED PROTEIN (FRAGMENT) 1 188 2.8e-68 NULL
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 1 188 2.8e-68 NULL
Gene3D G3DSA:3.30.420.10 no description 121 184 6.1e-09 NULL
superfamily SSF53098 Ribonuclease H-like 120 188 2.3e-13 IPR012337

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