Eca_sc000058.1_g3420.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_010277300.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 167 1 163 1e-81 255.68 79.64 88.62
Subject 427 1 164
Annot PREDICTED: transcription initiation factor TFIID subunit 15 [Nelumbo nucifera]
araport AT1G50300.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 167 10 163 1e-62 222.75 61.67 71.85
Subject 372 5 144
Annot | TBP-associated factor 15 | Chr1:18628818-18631662 REVERSE LENGTH=372 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMPfam PF00076 RRM_1 15 92 8e-09 IPR000504
ProfileScan PS50102 RRM 13 99 11.281 IPR000504
HMMSmart SM00360 RNA recognition motif 14 95 5.8e-11 IPR000504
HMMPanther PTHR12999:SF1 GB DEF: AT1G50300/F14I3_23 (TAF15) 8 163 1.1e-91 NULL
HMMPanther PTHR12999 FAMILY NOT NAMED 8 163 1.1e-91 NULL
Gene3D G3DSA:3.30.70.330 no description 7 143 6.5e-18 IPR012677
superfamily SSF54928 RNA-binding domain, RBD 5 105 1.2e-20 NULL

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