Eca_sc000058.1_g3480.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_010277322.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 326 4 305 e-158 165.33 66.25 78.83
Subject 539 3 303
Annot PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nelumbo nucifera] XP_010277323.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nelumbo nucifera] XP_010277324.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nelumbo nucifera] XP_010277325.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nelumbo nucifera] XP_010277326.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nelumbo nucifera]
araport AT5G66520.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 326 27 299 6e-74 190.18 35.58 53.98
Subject 620 28 301
Annot | Tetratricopeptide repeat (TPR)-like superfamily protein | Chr5:26551879-26553741 FORWARD LENGTH=620 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMPfam PF13041 PPR_2 76 123 4.9e-11 IPR002885
HMMPfam PF13041 PPR_2 209 245 1.2e-10 IPR002885
ProfileScan PS51375 PPR 77 111 10.479 IPR002885
ProfileScan PS51375 PPR 209 243 12.836 IPR002885
ProfileScan PS51375 PPR 178 208 11.060 IPR002885
ProfileScan PS51375 PPR 279 313 5.272 IPR002885
HMMPanther PTHR24015:SF61 PGR3 (PROTON GRADIENT REGULATION 3) 25 301 5.2e-107 NULL
HMMPanther PTHR24015 FAMILY NOT NAMED 25 301 5.2e-107 NULL
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 80 112 9.1e-07 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 180 211 5.1e-08 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 211 244 2.7e-09 IPR002885

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