Eca_sc000058.1_g3630.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_010277322.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 244 1 238 e-128 220.90 74.59 86.06
Subject 539 287 524
Annot PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nelumbo nucifera] XP_010277323.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nelumbo nucifera] XP_010277324.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nelumbo nucifera] XP_010277325.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nelumbo nucifera] XP_010277326.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nelumbo nucifera]
araport AT5G66520.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 244 1 242 4e-73 254.09 45.08 67.21
Subject 620 291 532
Annot | Tetratricopeptide repeat (TPR)-like superfamily protein | Chr5:26551879-26553741 FORWARD LENGTH=620 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMPfam PF01535 PPR 2 22 0.015 IPR002885
HMMPfam PF01535 PPR 96 121 0.00022 IPR002885
HMMPfam PF13041 PPR_2 22 69 1.1e-11 IPR002885
ProfileScan PS51375 PPR 22 56 11.652 IPR002885
ProfileScan PS51375 PPR 1 21 6.686 IPR002885
ProfileScan PS51375 PPR 57 92 8.802 IPR002885
ProfileScan PS51375 PPR 93 123 8.221 IPR002885
ProfileScan PS51375 PPR 125 159 6.599 IPR002885
HMMPanther PTHR24015:SF136 SUBFAMILY NOT NAMED 1 241 6.7e-117 NULL
HMMPanther PTHR24015 FAMILY NOT NAMED 1 241 6.7e-117 NULL
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 2 23 0.00092 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 25 58 5.1e-06 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 59 93 1.7e-05 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 97 120 0.00025 IPR002885

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