Eca_sc000058.1_g3720.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_010277322.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 196 22 196 7e-87 275 65.30 75.51
Subject 539 222 391
Annot PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nelumbo nucifera] XP_010277323.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nelumbo nucifera] XP_010277324.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nelumbo nucifera] XP_010277325.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nelumbo nucifera] XP_010277326.1 PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Nelumbo nucifera]
araport AT5G40405.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 196 22 194 2e-51 312.24 42.34 60.20
Subject 612 219 386
Annot | Tetratricopeptide repeat (TPR)-like superfamily protein | Chr5:16169315-16171153 FORWARD LENGTH=612 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMPanther PTHR24015:SF140 SUBFAMILY NOT NAMED 43 196 7.4e-83 NULL
HMMPanther PTHR24015 FAMILY NOT NAMED 43 196 7.4e-83 NULL
ProfileScan PS51375 PPR 113 147 11.794 IPR002885
ProfileScan PS51375 PPR 82 112 7.256 IPR002885
ProfileScan PS51375 PPR 148 183 8.802 IPR002885
HMMPfam PF13041 PPR_2 113 160 2.9e-12 IPR002885
HMMPfam PF01535 PPR 87 113 0.0016 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 87 114 4.8e-05 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 116 149 1.2e-06 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 150 183 4.4e-05 IPR002885

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