Eca_sc000058.1_g4480.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_010273523.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 162 1 157 3e-38 645.67 53.08 67.28
Subject 1046 253 417
Annot PREDICTED: pre-mRNA-processing protein 40A [Nelumbo nucifera] XP_010273530.1 PREDICTED: pre-mRNA-processing protein 40A [Nelumbo nucifera]
araport AT1G44910.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 162 1 120 2e-25 571.60 39.50 51.23
Subject 926 219 343
Annot | pre-mRNA-processing protein 40A | Chr1:16975930-16982647 FORWARD LENGTH=926 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMPanther PTHR11864:SF0 PRE-MRNA-PROCESSING PROTEIN PRP40 1 86 6.3e-19 IPR027237
HMMPanther PTHR11864 PRE-MRNA-PROCESSING PROTEIN PRP40 1 86 6.3e-19 NULL
superfamily SSF51045 WW domain 11 48 6.1e-11 IPR001202
ProfileScan PS50020 WW_DOMAIN_2 7 40 12.511 IPR001202
HMMPfam PF00397 WW 13 38 1.4e-08 IPR001202
HMMSmart SM00456 Domain with 2 conserved Trp (W) residues 8 40 2e-07 IPR001202
Gene3D G3DSA:2.20.70.10 no description 13 42 1.2e-15 NULL

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