Eca_sc000071.1_g0850.1
Sequence
Init: Term:
reverse complement
BLAST
nr KYP69041.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 636 1 625 0.0 211.00 54.71 71.38
Subject 1342 1 613
Annot Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]
araport AT1G48720.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 636 2 95 5e-25 15.25 7.54 10.69
Subject 97 3 94
Annot | Copia-like polyprotein/retrotransposon | Chr1:18018148-18018441 FORWARD LENGTH=97 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
ProfileScan PS50158 ZF_CCHC 292 305 9.422 IPR001878
ProfileScan PS50994 INTEGRASE 532 636 12.372 IPR001584
Gene3D G3DSA:4.10.60.10 no description 285 307 0.00039 IPR001878
Gene3D G3DSA:3.30.420.10 no description 530 625 7.5e-17 NULL
HMMPanther PTHR11439:SF127 PREDICTED PROTEIN (FRAGMENT) 7 624 1.6e-159 NULL
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 7 624 1.6e-159 NULL
superfamily SSF53098 Ribonuclease H-like 529 624 3.4e-22 IPR012337
HMMPfam PF14223 UBN2 90 205 3.4e-36 NULL
HMMPfam PF00665 rve 535 625 9.3e-20 IPR001584
HMMPfam PF13976 gag_pre-integrs 466 520 3.1e-16 IPR025724
HMMPfam PF13961 DUF4219 12 37 1.9e-10 IPR025314
HMMPfam PF00098 zf-CCHC 291 306 0.00015 IPR001878

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