Eca_sc000071.1_g1020.1
Sequence
Init: Term:
reverse complement
BLAST
nr BAG72096.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 484 1 484 0.0 272.93 64.87 78.30
Subject 1321 375 871
Annot Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
araport AT4G23160.3 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 484 407 484 8e-14 215.49 7.02 10.33
Subject 1043 80 154
Annot | cysteine-rich RECEPTOR-like kinase | Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
ProfileScan PS50994 INTEGRASE 70 244 21.968 IPR001584
Gene3D G3DSA:3.30.420.10 no description 70 237 2.4e-30 NULL
HMMPanther PTHR11439:SF127 PREDICTED PROTEIN (FRAGMENT) 10 484 5.6e-151 NULL
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 10 484 5.6e-151 NULL
superfamily SSF53098 Ribonuclease H-like 67 253 4.2e-42 IPR012337
HMMPfam PF00665 rve 72 198 7.4e-26 IPR001584
HMMPfam PF07727 RVT_2 442 484 8.7e-14 IPR013103
HMMPfam PF13976 gag_pre-integrs 14 59 9.9e-12 IPR025724

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