Eca_sc000081.1_g0170.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_010256343.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 615 7 577 0.0 94.14 62.76 75.77
Subject 579 2 571
Annot PREDICTED: pentatricopeptide repeat-containing protein At3g56550 [Nelumbo nucifera]
araport AT3G56550.2 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 615 12 578 0.0 94.47 52.52 68.78
Subject 581 8 574
Annot | Pentatricopeptide repeat (PPR) superfamily protein | Chr3:20952896-20954641 REVERSE LENGTH=581 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
ProfileScan PS51375 PPR 73 107 9.065 IPR002885
ProfileScan PS51375 PPR 175 209 11.915 IPR002885
ProfileScan PS51375 PPR 144 174 7.377 IPR002885
ProfileScan PS51375 PPR 109 143 6.774 IPR002885
ProfileScan PS51375 PPR 276 310 10.369 IPR002885
ProfileScan PS51375 PPR 245 275 9.109 IPR002885
ProfileScan PS51375 PPR 210 244 6.073 IPR002885
ProfileScan PS51375 PPR 311 341 8.144 IPR002885
ProfileScan PS51375 PPR 347 381 6.423 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 76 109 0.00074 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 177 210 1e-08 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 278 311 0.0012 IPR002885
HMMTigr TIGR00756 PPR: pentatricopeptide repeat domain 314 346 5.8e-05 IPR002885
Gene3D G3DSA:1.25.40.10 no description 165 336 0.00044 IPR011990
HMMPfam PF01535 PPR 146 175 0.12 IPR002885
HMMPfam PF01535 PPR 351 373 0.12 IPR002885
HMMPfam PF13041 PPR_2 75 120 1.1e-07 IPR002885
HMMPfam PF13041 PPR_2 175 221 6.4e-09 IPR002885
HMMPfam PF13041 PPR_2 276 323 3.1e-07 IPR002885
HMMPfam PF14432 DYW_deaminase 459 575 8.7e-16 NULL
HMMPanther PTHR24015:SF109 SUBFAMILY NOT NAMED 2 577 1.1e-237 NULL
HMMPanther PTHR24015 FAMILY NOT NAMED 2 577 1.1e-237 NULL

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