Eca_sc000081.1_g1280.1
Sequence
Init: Term:
reverse complement
BLAST
nr AAT85194.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 767 10 766 0.0 161.79 49.80 66.36
Subject 1241 105 859
Annot putative polyprotein [Oryza sativa Japonica Group]
araport AT4G23160.3 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 767 583 766 1e-33 135.98 11.21 14.60
Subject 1043 22 216
Annot | cysteine-rich RECEPTOR-like kinase | Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMSmart SM00343 zinc finger 43 59 0.0025 IPR001878
ProfileScan PS50158 ZF_CCHC 44 59 9.719 IPR001878
ProfileScan PS50994 INTEGRASE 282 454 20.106 IPR001584
superfamily SSF53098 Ribonuclease H-like 285 458 6.4e-43 IPR012337
superfamily SSF56672 DNA/RNA polymerases 660 760 6.2e-08 NULL
HMMPanther PTHR11439:SF127 PREDICTED PROTEIN (FRAGMENT) 18 766 7.6e-251 NULL
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 18 766 7.6e-251 NULL
HMMPfam PF07727 RVT_2 661 767 7.2e-48 IPR013103
HMMPfam PF00665 rve 290 407 1.8e-28 IPR001584
HMMPfam PF13976 gag_pre-integrs 229 277 9.1e-13 IPR025724
HMMPfam PF00098 zf-CCHC 42 59 9e-05 IPR001878
Gene3D G3DSA:4.10.60.10 no description 37 61 0.00098 IPR001878
Gene3D G3DSA:3.30.420.10 no description 288 447 1.1e-32 NULL

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