Eca_sc000102.1_g0320.1
Sequence
Init: Term:
reverse complement
BLAST
nr AAC26250.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 559 3 469 0.0 172.45 50.62 62.61
Subject 964 95 540
Annot contains similarity to reverse transcriptase (Pfam: rvt.hmm, score 19.29) [Arabidopsis thaliana] CAB80804.1 putative retrotransposon protein [Arabidopsis thaliana]
araport AT4G23160.3 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 559 363 473 3e-21 186.58 8.22 11.62
Subject 1043 78 185
Annot | cysteine-rich RECEPTOR-like kinase | Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
superfamily SSF53098 Ribonuclease H-like 39 214 5.7e-45 IPR012337
HMMPfam PF07727 RVT_2 400 457 1.6e-21 IPR013103
HMMPfam PF07727 RVT_2 459 520 4.2e-14 IPR013103
HMMPfam PF00665 rve 44 162 1.3e-29 IPR001584
ProfileScan PS50994 INTEGRASE 43 208 22.947 IPR001584
Gene3D G3DSA:3.30.420.10 no description 43 201 2.6e-31 NULL
HMMPanther PTHR11439:SF127 PREDICTED PROTEIN (FRAGMENT) 24 550 4.6e-180 NULL
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 24 550 4.6e-180 NULL

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