Eca_sc000108.1_g1470.1
Sequence
Init: Term:
reverse complement
BLAST
nr KYP71220.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 520 20 520 e-133 132.69 43.84 63.07
Subject 690 42 576
Annot Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]
araport ATMG00300.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 520 360 459 2e-20 27.88 7.88 12.11
Subject 145 29 125
Annot | Gag-Pol-related retrotransposon family protein | ChrM:89617-90054 REVERSE LENGTH=145 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
Gene3D G3DSA:4.10.60.10 no description 209 230 6.1e-05 IPR001878
Gene3D G3DSA:3.30.420.10 no description 470 520 4.1e-06 NULL
Coil coil coiled-coil 229 250 NA NULL
HMMPfam PF14227 UBN2_2 57 169 2.7e-33 NULL
HMMPfam PF13976 gag_pre-integrs 378 446 6.2e-12 IPR025724
HMMPfam PF00665 rve 467 520 3.1e-08 IPR001584
HMMPfam PF00098 zf-CCHC 212 229 5.1e-05 IPR001878
ProfileScan PS50158 ZF_CCHC 214 229 9.916 IPR001878
HMMSmart SM00343 zinc finger 213 229 0.0015 IPR001878
superfamily SSF53098 Ribonuclease H-like 444 520 2.5e-09 IPR012337
superfamily SSF57756 Retrovirus zinc finger-like domains 189 244 4.7e-06 IPR001878
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 28 520 7.3e-92 NULL

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