| nr | AAL66754.1 | Length | Start | End | E-value | Length(%) | Iden(%) | Posi(%) | |
|---|---|---|---|---|---|---|---|---|---|
| Query | 1038 | 158 | 1031 | e-145 | 126.49 | 30.15 | 44.21 | ||
| Subject | 1313 | 230 | 1075 | ||||||
| Annot | putative copia-like retrotransposon Hopscotch polyprotein [Zea mays] | ||||||||
| araport | AT4G23160.3 | Length | Start | End | E-value | Length(%) | Iden(%) | Posi(%) | |
| Query | 1038 | 760 | 1029 | 2e-70 | 100.48 | 11.56 | 17.63 | ||
| Subject | 1043 | 85 | 358 | ||||||
| Annot | | cysteine-rich RECEPTOR-like kinase | Chr4:12129485-12133157 FORWARD LENGTH=1043 | 201606 | ||||||||
| Analysis | Signature | Location | E-value | InterPro | ||
|---|---|---|---|---|---|---|
| Accession | Description | Start | Stop | |||
| ProfileScan | PS50158 | ZF_CCHC | 186 | 199 | 9.125 | IPR001878 |
| HMMSmart | SM00343 | zinc finger | 185 | 201 | 0.005 | IPR001878 |
| HMMPanther | PTHR11439:SF127 | PREDICTED PROTEIN (FRAGMENT) | 143 | 1029 | 1.2e-235 | NULL |
| HMMPanther | PTHR11439 | GAG-POL-RELATED RETROTRANSPOSON | 143 | 1029 | 1.2e-235 | NULL |
| HMMPfam | PF07727 | RVT_2 | 787 | 1029 | 2.1e-98 | IPR013103 |
| HMMPfam | PF14244 | UBN2_3 | 32 | 136 | 4.1e-11 | NULL |
| HMMPfam | PF13976 | gag_pre-integrs | 354 | 408 | 1.4e-09 | IPR025724 |
| HMMPfam | PF00098 | zf-CCHC | 185 | 200 | 0.00021 | IPR001878 |
| superfamily | SSF56672 | DNA/RNA polymerases | 786 | 1014 | 2.9e-23 | NULL |
| superfamily | SSF53098 | Ribonuclease H-like | 421 | 491 | 1.6e-07 | IPR012337 |