Eca_sc000112.1_g0170.1
Sequence
Init: Term:
reverse complement
BLAST
nr AAX96781.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 545 1 487 3e-79 214.67 42.93 55.41
Subject 1170 473 1147
Annot retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa Japonica Group] ABA92543.1 retrotransposon protein, putative, Ty1-copia subclass, expressed [Oryza sativa Japonica Group]
araport # Length Start End E-value Length(%) Iden(%) Posi(%)
Query # # # # # # #
Subject # # #
Annot
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
ProfileScan PS50994 INTEGRASE 78 121 8.521 IPR001584
HMMPanther PTHR11439:SF127 PREDICTED PROTEIN (FRAGMENT) 1 472 1.1e-75 NULL
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 1 472 1.1e-75 NULL
Gene3D G3DSA:3.30.420.10 no description 56 121 1.7e-10 NULL
HMMPfam PF07727 RVT_2 302 330 2.5e-06 IPR013103
HMMPfam PF07727 RVT_2 335 403 3.8e-15 IPR013103
HMMPfam PF00665 rve 56 121 2.1e-13 IPR001584
superfamily SSF53098 Ribonuclease H-like 41 120 7.1e-13 IPR012337

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