Eca_sc000113.1_g0240.1
Sequence
Init: Term:
reverse complement
BLAST
nr KYP71220.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 668 1 503 e-144 103.29 35.32 51.19
Subject 690 23 521
Annot Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]
araport ATMG00300.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 668 355 468 3e-29 21.70 7.63 11.22
Subject 145 27 137
Annot | Gag-Pol-related retrotransposon family protein | ChrM:89617-90054 REVERSE LENGTH=145 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
ProfileScan PS50158 ZF_CCHC 210 225 8.565 IPR001878
HMMPfam PF14227 UBN2_2 55 163 4.3e-32 NULL
HMMPfam PF13976 gag_pre-integrs 395 443 3.3e-12 IPR025724
HMMPfam PF00665 rve 456 501 2e-07 IPR001584
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 26 568 2.2e-114 NULL
superfamily SSF53098 Ribonuclease H-like 451 501 5.3e-09 IPR012337
HMMSmart SM00343 zinc finger 209 225 0.0081 IPR001878
Gene3D G3DSA:3.30.420.10 no description 454 503 1.4e-05 NULL

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