Eca_sc000118.1_g0110.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_006451562.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 238 1 235 e-164 99.15 93.27 96.21
Subject 236 1 235
Annot hypothetical protein CICLE_v10009346mg [Citrus clementina] XP_006490820.1 PREDICTED: 40S ribosomal protein S3-3 [Citrus sinensis] ESR64802.1 hypothetical protein CICLE_v10009346mg [Citrus clementina] KDO53538.1 hypothetical protein CISIN_1g026588mg [Citrus sinensis]
araport AT5G35530.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 238 1 227 e-152 104.20 85.71 90.75
Subject 248 1 227
Annot | Ribosomal protein S3 family protein | Chr5:13710355-13712192 REVERSE LENGTH=248 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
ProfileScan PS50823 KH_TYPE_2 21 92 11.334 IPR004044
HMMTigr TIGR01008 rpsC_E_A: ribosomal protein S3 8 210 1.3e-71 IPR005703
HMMPanther PTHR11760:SF9 40S RIBOSOMAL PROTEIN S3 1 238 9.5e-146 NULL
HMMPanther PTHR11760 30S/40S RIBOSOMAL PROTEIN S3 1 238 9.5e-146 NULL
superfamily SSF54821 Ribosomal protein S3 C-terminal domain 92 193 9e-29 IPR001351
superfamily SSF54814 Prokaryotic type KH domain (KH-domain type II) 10 101 1.4e-25 IPR009019
HMMPfam PF00189 Ribosomal_S3_C 105 188 4.9e-18 IPR001351
HMMPfam PF07650 KH_2 20 94 4.9e-13 IPR004044
Gene3D G3DSA:3.30.300.20 no description 21 86 0.00057 IPR015946
Gene3D G3DSA:3.30.1140.32 no description 93 193 2.3e-31 IPR001351
PatternScan PS00548 RIBOSOMAL_S3 147 183 NA IPR018280

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