Eca_sc000118.1_g0340.1
Sequence
Init: Term:
reverse complement
BLAST
nr AAC12735.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 236 1 166 6e-70 103.38 48.30 58.89
Subject 244 74 240
Annot putative retrovirus-related polyprotein, partial [Lithospermum erythrorhizon]
araport ATMG00300.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 236 1 102 9e-27 61.44 19.49 28.38
Subject 145 39 137
Annot | Gag-Pol-related retrotransposon family protein | ChrM:89617-90054 REVERSE LENGTH=145 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
superfamily SSF53098 Ribonuclease H-like 85 166 2.8e-14 IPR012337
HMMPfam PF13976 gag_pre-integrs 31 77 2.8e-13 IPR025724
HMMPfam PF00665 rve 92 166 4.2e-12 IPR001584
Gene3D G3DSA:3.30.420.10 no description 90 166 1.6e-09 NULL
HMMPanther PTHR11439:SF127 PREDICTED PROTEIN (FRAGMENT) 33 220 4.1e-58 NULL
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 33 220 4.1e-58 NULL

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