Eca_sc000130.1_g0200.1
Sequence
Init: Term:
reverse complement
BLAST
nr KYP59893.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 377 5 377 8e-89 157.29 42.17 64.19
Subject 593 155 556
Annot Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]
araport ATMG00300.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 377 215 316 4e-20 38.46 10.87 16.71
Subject 145 27 125
Annot | Gag-Pol-related retrotransposon family protein | ChrM:89617-90054 REVERSE LENGTH=145 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
HMMSmart SM00343 zinc finger 69 85 0.0022 IPR001878
superfamily SSF53098 Ribonuclease H-like 318 377 2.3e-08 IPR012337
Gene3D G3DSA:4.10.60.10 no description 65 86 0.00082 IPR001878
Gene3D G3DSA:3.30.420.10 no description 328 377 1.6e-05 NULL
ProfileScan PS50158 ZF_CCHC 70 85 9.422 IPR001878
HMMPfam PF13976 gag_pre-integrs 234 303 7.6e-13 IPR025724
HMMPfam PF00665 rve 320 377 1e-08 IPR001584
HMMPfam PF00077 RVP 125 210 5.6e-05 IPR018061
HMMPfam PF00098 zf-CCHC 68 85 9.1e-05 IPR001878
HMMPanther PTHR11439 GAG-POL-RELATED RETROTRANSPOSON 45 377 2.3e-72 NULL

Top