Eca_sc000130.1_g1300.1
Sequence
Init: Term:
reverse complement
BLAST
nr XP_010242492.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 167 1 167 e-115 105.98 97.00 99.40
Subject 177 11 177
Annot PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Nelumbo nucifera] XP_010242493.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Nelumbo nucifera] XP_010242494.1 PREDICTED: DNA-directed RNA polymerase II subunit RPB7 [Nelumbo nucifera]
araport AT5G59180.1 Length Start End E-value Length(%) Iden(%) Posi(%)
Query 167 1 166 e-109 105.38 89.22 94.61
Subject 176 11 176
Annot | DNA-directed RNA polymerase II | Chr5:23883499-23884976 FORWARD LENGTH=176 | 201606
InterProScan
Analysis Signature Location E-value InterPro
Accession Description Start Stop
superfamily SSF50249 Nucleic acid-binding proteins 69 160 2.2e-21 IPR012340
superfamily SSF88798 N-terminal, heterodimerisation domain of RBP7 (RpoE) 1 67 6.7e-17 IPR005576
HMMPfam PF03876 SHS2_Rpb7-N 2 67 2e-16 IPR005576
HMMPfam PF00575 S1 68 146 8.2e-14 IPR003029
HMMPanther PTHR12709 DNA-DIRECTED RNA POLYMERASE II, III 1 160 1.6e-65 NULL
Gene3D G3DSA:3.30.1490.120 no description 2 72 1.8e-21 IPR005576
Gene3D G3DSA:2.40.50.140 no description 73 160 3.5e-33 IPR012340

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